Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.91□□□□□ -0.5
P01852 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.91□□□□□ -0.5
P01852 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.91□□□□□ -0.5
P01852 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.91□□□□□ -0.5
P01852 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.91□□□□□ -0.5
P01852 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.91□□□□□ -0.5
P01852 Mir7221-201ENSMUST00000184009 72 ntBASIC11.91□□□□□ -0.5
P01852 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.91□□□□□ -0.5
P01852 Gm18062-201ENSMUST00000208020 547 ntBASIC11.91□□□□□ -0.5
P01852 Gm18055-201ENSMUST00000208254 547 ntBASIC11.91□□□□□ -0.5
P01852 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.91□□□□□ -0.5
P01852 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.91□□□□□ -0.5
P01852 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.91□□□□□ -0.5
P01852 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.91□□□□□ -0.5
P01852 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
P01852 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
P01852 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
P01852 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
P01852 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
P01852 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
P01852 Gm27331-201ENSMUST00000183705 60 ntBASIC11.9□□□□□ -0.5
P01852 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Gm29705-201ENSMUST00000212598 474 ntBASIC11.9□□□□□ -0.5
P01852 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.9□□□□□ -0.5
P01852 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
P01852 Gm25857-201ENSMUST00000082788 129 ntBASIC11.9□□□□□ -0.5
P01852 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
P01852 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.9□□□□□ -0.5
P01852 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.9□□□□□ -0.5
P01852 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P01852 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
P01852 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
P01852 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
P01852 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P01852 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P01852 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
P01852 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.89□□□□□ -0.51
P01852 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P01852 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.89□□□□□ -0.51
P01852 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P01852 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.89□□□□□ -0.51
P01852 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.89□□□□□ -0.51
P01852 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.89□□□□□ -0.51
P01852 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
P01852 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P01852 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Gm4271-201ENSMUST00000174444 973 ntBASIC11.89□□□□□ -0.51
P01852 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P01852 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.89□□□□□ -0.51
P01852 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.89□□□□□ -0.51
P01852 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.89□□□□□ -0.51
P01852 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms