Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Gm37497-201ENSMUST00000195830 798 ntBASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igh-VJ558P01758 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Gm27892-201ENSMUST00000185017 106 ntBASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.22□□□□□ -0.61
Igh-VJ558P01758 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Gm5356-201ENSMUST00000093326 615 ntBASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igh-VJ558P01758 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm12203-201ENSMUST00000118235 598 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm11814-201ENSMUST00000119515 929 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm12209-201ENSMUST00000120089 596 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm12490-201ENSMUST00000120255 560 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm11637-201ENSMUST00000120601 592 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm16479-201ENSMUST00000121706 932 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm9002-201ENSMUST00000178437 499 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm8652-201ENSMUST00000181363 964 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Igh-VJ558P01758 Gm9794-201ENSMUST00000202370 423 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms