Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcn1O88704 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.47□□□□□ -0.41
Hcn1O88704 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hcn1O88704 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.46□□□□□ -0.41
Hcn1O88704 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.46□□□□□ -0.41
Hcn1O88704 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.46□□□□□ -0.41
Hcn1O88704 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Hcn1O88704 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.46□□□□□ -0.41
Hcn1O88704 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.46□□□□□ -0.41
Hcn1O88704 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Gm42550-201ENSMUST00000201553 960 ntBASIC12.46□□□□□ -0.41
Hcn1O88704 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.46□□□□□ -0.41
Hcn1O88704 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcn1O88704 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hcn1O88704 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hcn1O88704 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hcn1O88704 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hcn1O88704 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hcn1O88704 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hcn1O88704 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hcn1O88704 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hcn1O88704 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hcn1O88704 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hcn1O88704 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Hcn1O88704 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Hcn1O88704 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hcn1O88704 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hcn1O88704 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Gm12403-201ENSMUST00000121384 959 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm44397-201ENSMUST00000195950 113 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.45□□□□□ -0.42
Hcn1O88704 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.45□□□□□ -0.42
Hcn1O88704 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hcn1O88704 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hcn1O88704 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms