Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Gm40466-201ENSMUST00000212174 422 ntBASIC12.76□□□□□ -0.37
ClppO88696 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.76□□□□□ -0.37
ClppO88696 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.76□□□□□ -0.37
ClppO88696 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ClppO88696 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ClppO88696 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ClppO88696 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ClppO88696 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.76□□□□□ -0.37
ClppO88696 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClppO88696 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
ClppO88696 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.75□□□□□ -0.37
ClppO88696 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ClppO88696 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
ClppO88696 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.75□□□□□ -0.37
ClppO88696 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.75□□□□□ -0.37
ClppO88696 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.75□□□□□ -0.37
ClppO88696 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.75□□□□□ -0.37
ClppO88696 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ClppO88696 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.75□□□□□ -0.37
ClppO88696 Gm27514-201ENSMUST00000183692 110 ntBASIC12.75□□□□□ -0.37
ClppO88696 Gm5370-201ENSMUST00000187187 574 ntBASIC12.75□□□□□ -0.37
ClppO88696 Gm42693-201ENSMUST00000196779 631 ntBASIC12.75□□□□□ -0.37
ClppO88696 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.75□□□□□ -0.37
ClppO88696 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Matn2-203ENSMUST00000226766 3252 ntBASIC12.75□□□□□ -0.37
ClppO88696 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Gm16372-201ENSMUST00000073088 450 ntBASIC12.75□□□□□ -0.37
ClppO88696 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ClppO88696 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClppO88696 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ClppO88696 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
ClppO88696 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.74□□□□□ -0.37
ClppO88696 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ClppO88696 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
ClppO88696 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.74□□□□□ -0.37
ClppO88696 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
ClppO88696 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.74□□□□□ -0.37
ClppO88696 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.74□□□□□ -0.37
ClppO88696 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.74□□□□□ -0.37
ClppO88696 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.74□□□□□ -0.37
ClppO88696 Gm8810-201ENSMUST00000172895 754 ntBASIC12.74□□□□□ -0.37
ClppO88696 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ClppO88696 Gm27331-201ENSMUST00000183705 60 ntBASIC12.74□□□□□ -0.37
ClppO88696 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.74□□□□□ -0.37
ClppO88696 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.74□□□□□ -0.37
ClppO88696 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Gm45331-201ENSMUST00000209868 554 ntBASIC12.74□□□□□ -0.37
ClppO88696 Gm29705-201ENSMUST00000212598 474 ntBASIC12.74□□□□□ -0.37
ClppO88696 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.74□□□□□ -0.37
ClppO88696 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClppO88696 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms