Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.25□□□□□ -0.77
Pde6dO55057 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pde6dO55057 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pde6dO55057 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.24□□□□□ -0.77
Pde6dO55057 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.24□□□□□ -0.77
Pde6dO55057 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.24□□□□□ -0.77
Pde6dO55057 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Pde6dO55057 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.24□□□□□ -0.77
Pde6dO55057 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.24□□□□□ -0.77
Pde6dO55057 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.24□□□□□ -0.77
Pde6dO55057 Gm34391-201ENSMUST00000203706 907 ntBASIC10.24□□□□□ -0.77
Pde6dO55057 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.24□□□□□ -0.77
Pde6dO55057 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pde6dO55057 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.24□□□□□ -0.77
Pde6dO55057 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.24□□□□□ -0.77
Pde6dO55057 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Pde6dO55057 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pde6dO55057 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Pde6dO55057 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Pde6dO55057 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.23□□□□□ -0.77
Pde6dO55057 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm4804-201ENSMUST00000182234 999 ntBASIC10.23□□□□□ -0.77
Pde6dO55057 Gm21470-201ENSMUST00000187680 696 ntBASIC10.23□□□□□ -0.77
Pde6dO55057 Gm33320-201ENSMUST00000192232 530 ntBASIC10.23□□□□□ -0.77
Pde6dO55057 Gm19184-201ENSMUST00000196798 928 ntBASIC10.23□□□□□ -0.77
Pde6dO55057 Gm6916-202ENSMUST00000205523 195 ntBASIC10.23□□□□□ -0.77
Pde6dO55057 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm5425-201ENSMUST00000214125 459 ntBASIC10.23□□□□□ -0.77
Pde6dO55057 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms