Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Limk2O54785 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Limk2O54785 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Limk2O54785 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Limk2O54785 Gm38002-201ENSMUST00000193255 180 ntBASIC13.19□□□□□ -0.3
Limk2O54785 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.19□□□□□ -0.3
Limk2O54785 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Limk2O54785 Gm43822-201ENSMUST00000200285 476 ntBASIC13.19□□□□□ -0.3
Limk2O54785 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.19□□□□□ -0.3
Limk2O54785 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.19□□□□□ -0.3
Limk2O54785 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Gm9823-201ENSMUST00000051212 327 ntBASIC13.19□□□□□ -0.3
Limk2O54785 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.19□□□□□ -0.3
Limk2O54785 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Limk2O54785 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.19□□□□□ -0.3
Limk2O54785 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Limk2O54785 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Limk2O54785 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.18□□□□□ -0.3
Limk2O54785 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.18□□□□□ -0.3
Limk2O54785 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.18□□□□□ -0.3
Limk2O54785 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.18□□□□□ -0.3
Limk2O54785 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.18□□□□□ -0.3
Limk2O54785 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.18□□□□□ -0.3
Limk2O54785 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.18□□□□□ -0.3
Limk2O54785 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.18□□□□□ -0.3
Limk2O54785 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.18□□□□□ -0.3
Limk2O54785 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.18□□□□□ -0.3
Limk2O54785 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Limk2O54785 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.18□□□□□ -0.3
Limk2O54785 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Limk2O54785 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Limk2O54785 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Limk2O54785 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Limk2O54785 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Limk2O54785 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Limk2O54785 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Limk2O54785 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Limk2O54785 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.17□□□□□ -0.3
Limk2O54785 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Limk2O54785 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Limk2O54785 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Limk2O54785 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Limk2O54785 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Limk2O54785 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.17□□□□□ -0.3
Limk2O54785 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms