Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.96□□□□□ -0.17
Nr1i3O35627 Gm28693-202ENSMUST00000190758 331 ntBASIC13.96□□□□□ -0.17
Nr1i3O35627 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.96□□□□□ -0.17
Nr1i3O35627 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.96□□□□□ -0.17
Nr1i3O35627 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.96□□□□□ -0.17
Nr1i3O35627 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nr1i3O35627 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Nr1i3O35627 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Nr1i3O35627 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1i3O35627 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1i3O35627 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1i3O35627 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.96□□□□□ -0.18
Nr1i3O35627 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1i3O35627 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
Nr1i3O35627 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Nr1i3O35627 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1i3O35627 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1i3O35627 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Gm45668-201ENSMUST00000211271 493 ntBASIC13.95□□□□□ -0.18
Nr1i3O35627 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nr1i3O35627 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.95□□□□□ -0.18
Nr1i3O35627 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nr1i3O35627 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.95□□□□□ -0.18
Nr1i3O35627 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1i3O35627 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.94□□□□□ -0.18
Nr1i3O35627 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm12928-201ENSMUST00000117115 573 ntBASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm27437-201ENSMUST00000183429 107 ntBASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm7063-201ENSMUST00000186840 981 ntBASIC13.94□□□□□ -0.18
Nr1i3O35627 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.94□□□□□ -0.18
Nr1i3O35627 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms