Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.61□□□□□ -0.55
Alx4O35137 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Alx4O35137 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Alx4O35137 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Gm15376-201ENSMUST00000122258 783 ntBASIC11.61□□□□□ -0.55
Alx4O35137 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.61□□□□□ -0.55
Alx4O35137 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.61□□□□□ -0.55
Alx4O35137 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Alx4O35137 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.61□□□□□ -0.55
Alx4O35137 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.61□□□□□ -0.55
Alx4O35137 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Alx4O35137 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Alx4O35137 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Alx4O35137 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.6□□□□□ -0.55
Alx4O35137 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Alx4O35137 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Gm11978-201ENSMUST00000122315 466 ntBASIC11.6□□□□□ -0.55
Alx4O35137 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.6□□□□□ -0.55
Alx4O35137 Gm9522-201ENSMUST00000182394 926 ntBASIC11.6□□□□□ -0.55
Alx4O35137 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.6□□□□□ -0.55
Alx4O35137 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Alx4O35137 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.6□□□□□ -0.55
Alx4O35137 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Alx4O35137 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Alx4O35137 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Alx4O35137 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Alx4O35137 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.59□□□□□ -0.55
Alx4O35137 Gm13223-201ENSMUST00000118609 747 ntBASIC11.59□□□□□ -0.55
Alx4O35137 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Alx4O35137 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms