Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Polr1aO35134 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC19.61■□□□□ 0.73
Polr1aO35134 Gm17391-201ENSMUST00000171036 126 ntBASIC19.61■□□□□ 0.73
Polr1aO35134 Gm5732-201ENSMUST00000182596 1007 ntBASIC19.61■□□□□ 0.73
Polr1aO35134 Gm18304-201ENSMUST00000189162 546 ntBASIC19.61■□□□□ 0.73
Polr1aO35134 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Polr1aO35134 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC19.6■□□□□ 0.73
Polr1aO35134 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC19.6■□□□□ 0.73
Polr1aO35134 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC19.6■□□□□ 0.73
Polr1aO35134 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Gm7593-201ENSMUST00000187246 644 ntBASIC19.6■□□□□ 0.73
Polr1aO35134 Gm4482-201ENSMUST00000200876 742 ntBASIC19.6■□□□□ 0.73
Polr1aO35134 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC19.6■□□□□ 0.73
Polr1aO35134 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Polr1aO35134 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr1aO35134 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Polr1aO35134 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Gm19459-201ENSMUST00000176240 835 ntBASIC19.59■□□□□ 0.73
Polr1aO35134 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Polr1aO35134 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC19.59■□□□□ 0.73
Polr1aO35134 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Polr1aO35134 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC19.59■□□□□ 0.73
Polr1aO35134 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr1aO35134 Gm44891-201ENSMUST00000208817 2223 ntBASIC19.58■□□□□ 0.73
Polr1aO35134 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Polr1aO35134 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Polr1aO35134 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Polr1aO35134 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Polr1aO35134 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Polr1aO35134 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
Polr1aO35134 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Polr1aO35134 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Polr1aO35134 Gm12165-201ENSMUST00000117047 342 ntBASIC19.58■□□□□ 0.72
Polr1aO35134 Gm15131-201ENSMUST00000119124 595 ntBASIC19.58■□□□□ 0.72
Polr1aO35134 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC19.58■□□□□ 0.72
Polr1aO35134 Mir7686-201ENSMUST00000200604 57 ntBASIC19.58■□□□□ 0.72
Polr1aO35134 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Gm45909-201ENSMUST00000212413 1031 ntBASIC19.58■□□□□ 0.72
Polr1aO35134 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Polr1aO35134 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms