Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3yl1O08641 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Gm4984-201ENSMUST00000115987 360 ntBASIC12.42□□□□□ -0.42
Sh3yl1O08641 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.42□□□□□ -0.42
Sh3yl1O08641 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Gm6152-201ENSMUST00000151704 340 ntBASIC12.42□□□□□ -0.42
Sh3yl1O08641 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Gm27486-201ENSMUST00000184923 80 ntBASIC12.42□□□□□ -0.42
Sh3yl1O08641 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Sh3yl1O08641 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.42□□□□□ -0.42
Sh3yl1O08641 Itm2b-204ENSMUST00000228637 783 ntBASIC12.42□□□□□ -0.42
Sh3yl1O08641 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sh3yl1O08641 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.42□□□□□ -0.42
Sh3yl1O08641 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.42□□□□□ -0.42
Sh3yl1O08641 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3yl1O08641 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.41□□□□□ -0.42
Sh3yl1O08641 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Gm13612-201ENSMUST00000119276 390 ntBASIC12.41□□□□□ -0.42
Sh3yl1O08641 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.41□□□□□ -0.42
Sh3yl1O08641 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Gm18473-201ENSMUST00000220543 868 ntBASIC12.41□□□□□ -0.42
Sh3yl1O08641 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3yl1O08641 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3yl1O08641 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3yl1O08641 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3yl1O08641 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms