Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh9F8VPK8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Mir686-201ENSMUST00000102174 109 ntBASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Mir6392-201ENSMUST00000184924 108 ntBASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Itm2b-204ENSMUST00000228637 783 ntBASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh9F8VPK8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh9F8VPK8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh9F8VPK8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms