Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc188F6WEU2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Gm16071-201ENSMUST00000119589 793 ntBASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Gm22442-201ENSMUST00000157256 144 ntBASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Gm17826-201ENSMUST00000189720 798 ntBASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Gm5340-201ENSMUST00000203733 880 ntBASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Gm44980-201ENSMUST00000205826 314 ntBASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc188F6WEU2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Gm8199-201ENSMUST00000121323 823 ntBASIC13□□□□□ -0.33
Ccdc188F6WEU2 Gm12783-201ENSMUST00000121425 397 ntBASIC13□□□□□ -0.33
Ccdc188F6WEU2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Gm9061-201ENSMUST00000182707 1006 ntBASIC13□□□□□ -0.33
Ccdc188F6WEU2 Mir7677-201ENSMUST00000184226 67 ntBASIC13□□□□□ -0.33
Ccdc188F6WEU2 Gm9230-201ENSMUST00000188228 532 ntBASIC13□□□□□ -0.33
Ccdc188F6WEU2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Gm45527-201ENSMUST00000211052 774 ntBASIC13□□□□□ -0.33
Ccdc188F6WEU2 Gm45909-201ENSMUST00000212413 1031 ntBASIC13□□□□□ -0.33
Ccdc188F6WEU2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 CT030135.2-201ENSMUST00000225255 893 ntBASIC13□□□□□ -0.33
Ccdc188F6WEU2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc188F6WEU2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm22133-201ENSMUST00000102082 109 ntBASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm13809-201ENSMUST00000117921 597 ntBASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc188F6WEU2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms