Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb9E9Q5G2 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Gm12502-201ENSMUST00000120197 444 ntBASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Gm24548-201ENSMUST00000158650 108 ntBASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Gm6013-201ENSMUST00000212264 699 ntBASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb9E9Q5G2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Gm14921-201ENSMUST00000118643 908 ntBASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Gm11793-201ENSMUST00000120433 981 ntBASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb9E9Q5G2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Gm5781-201ENSMUST00000219792 443 ntBASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Gm45930-201ENSMUST00000221330 292 ntBASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.24■□□□□ 0.03
Pcdhb9E9Q5G2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms