Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm45085-201ENSMUST00000209100 441 ntBASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a3E9PWQ3 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm13445-201ENSMUST00000121664 307 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Gm29651-201ENSMUST00000189088 697 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a3E9PWQ3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Defa-ps16-201ENSMUST00000121939 171 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Gm7627-201ENSMUST00000183205 999 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Mir6953-201ENSMUST00000184745 68 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Gm27956-201ENSMUST00000175604 260 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Gm37851-201ENSMUST00000193871 889 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.6□□□□□ -0.39
Col6a3E9PWQ3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms