Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Gm15770-201ENSMUST00000117498 584 ntBASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Gm5866-201ENSMUST00000177881 973 ntBASIC13.06□□□□□ -0.32
Gm28043E0CXC2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Gm19220-201ENSMUST00000222682 803 ntBASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Gm2423-201ENSMUST00000074863 733 ntBASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.06□□□□□ -0.32
Gm28043E0CXC2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm28043E0CXC2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm19078-201ENSMUST00000206311 727 ntBASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm28043E0CXC2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Gm11524-201ENSMUST00000119349 807 ntBASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Gm28631-201ENSMUST00000190740 334 ntBASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Gm43094-201ENSMUST00000196549 921 ntBASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm28043E0CXC2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms