Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Rmrp-201ENSMUST00000157463 271 ntBASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Gm6407-201ENSMUST00000176468 549 ntBASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Gm42682-201ENSMUST00000198349 1265 ntBASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 AL732506.1-201ENSMUST00000226420 281 ntBASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Gm14150-201ENSMUST00000122404 1354 ntBASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hfm1D3Z4R1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Gm7666-201ENSMUST00000146631 819 ntBASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Gm37246-201ENSMUST00000192665 835 ntBASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hfm1D3Z4R1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Mir7677-201ENSMUST00000184226 67 ntBASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Gm5733-201ENSMUST00000190232 939 ntBASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Gm37905-201ENSMUST00000195310 341 ntBASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 AC138604.1-201ENSMUST00000226969 739 ntBASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Hfm1D3Z4R1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms