Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Gm9229-201ENSMUST00000222777 126 ntBASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Daam2-202ENSMUST00000224595 1926 ntBASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Gm12887B1AVM1 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm15653-201ENSMUST00000119247 907 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm12403-201ENSMUST00000121384 959 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm12887B1AVM1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms