Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.72□□□□□ -0.37
Chd3B1AR17 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.72□□□□□ -0.37
Chd3B1AR17 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.72□□□□□ -0.37
Chd3B1AR17 Gm10608-202ENSMUST00000213924 676 ntBASIC12.72□□□□□ -0.37
Chd3B1AR17 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.72□□□□□ -0.37
Chd3B1AR17 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd3B1AR17 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd3B1AR17 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd3B1AR17 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chd3B1AR17 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd3B1AR17 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chd3B1AR17 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd3B1AR17 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd3B1AR17 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Chd3B1AR17 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd3B1AR17 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.72□□□□□ -0.37
Chd3B1AR17 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd3B1AR17 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd3B1AR17 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd3B1AR17 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd3B1AR17 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chd3B1AR17 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chd3B1AR17 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chd3B1AR17 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.71□□□□□ -0.37
Chd3B1AR17 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chd3B1AR17 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chd3B1AR17 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Chd3B1AR17 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.71□□□□□ -0.37
Chd3B1AR17 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chd3B1AR17 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd3B1AR17 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Gm14704-201ENSMUST00000120300 874 ntBASIC12.71□□□□□ -0.38
Chd3B1AR17 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.71□□□□□ -0.38
Chd3B1AR17 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.71□□□□□ -0.38
Chd3B1AR17 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.71□□□□□ -0.38
Chd3B1AR17 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.71□□□□□ -0.38
Chd3B1AR17 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.71□□□□□ -0.38
Chd3B1AR17 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.71□□□□□ -0.38
Chd3B1AR17 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
Chd3B1AR17 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.71□□□□□ -0.38
Chd3B1AR17 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.71□□□□□ -0.38
Chd3B1AR17 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd3B1AR17 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Chd3B1AR17 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.7□□□□□ -0.38
Chd3B1AR17 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chd3B1AR17 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Chd3B1AR17 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Gm4986-201ENSMUST00000119731 549 ntBASIC12.7□□□□□ -0.38
Chd3B1AR17 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.7□□□□□ -0.38
Chd3B1AR17 Gm43822-201ENSMUST00000200285 476 ntBASIC12.7□□□□□ -0.38
Chd3B1AR17 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.7□□□□□ -0.38
Chd3B1AR17 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Chd3B1AR17 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.7□□□□□ -0.38
Chd3B1AR17 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Chd3B1AR17 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chd3B1AR17 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd3B1AR17 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chd3B1AR17 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chd3B1AR17 Gm13316-201ENSMUST00000140537 691 ntBASIC12.69□□□□□ -0.38
Chd3B1AR17 Gm32025-201ENSMUST00000217960 307 ntBASIC12.69□□□□□ -0.38
Chd3B1AR17 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms