Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm11127A7VMS2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.53□□□□□ -0.56
Gm11127A7VMS2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Gm12585-201ENSMUST00000117307 290 ntBASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Gm13453-201ENSMUST00000118708 357 ntBASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.53□□□□□ -0.56
Gm11127A7VMS2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Daam2-202ENSMUST00000224595 1926 ntBASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm11127A7VMS2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm13223-201ENSMUST00000118609 747 ntBASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm10766-202ENSMUST00000194123 606 ntBASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm11127A7VMS2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms