Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.97□□□□□ -0.65
Col6a4A2AX52 Gm14109-201ENSMUST00000118814 309 ntBASIC10.97□□□□□ -0.65
Col6a4A2AX52 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.97□□□□□ -0.65
Col6a4A2AX52 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.97□□□□□ -0.65
Col6a4A2AX52 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Gm43378-201ENSMUST00000199336 582 ntBASIC10.96□□□□□ -0.65
Col6a4A2AX52 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a4A2AX52 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.96□□□□□ -0.65
Col6a4A2AX52 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a4A2AX52 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.95□□□□□ -0.66
Col6a4A2AX52 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.95□□□□□ -0.66
Col6a4A2AX52 Gm25043-201ENSMUST00000158604 212 ntBASIC10.95□□□□□ -0.66
Col6a4A2AX52 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Gm5051-201ENSMUST00000204085 485 ntBASIC10.95□□□□□ -0.66
Col6a4A2AX52 Gm44100-201ENSMUST00000204329 436 ntBASIC10.95□□□□□ -0.66
Col6a4A2AX52 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.95□□□□□ -0.66
Col6a4A2AX52 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms