Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Itm2b-204ENSMUST00000228637 783 ntBASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm9947-201ENSMUST00000067599 2920 ntBASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm14928-201ENSMUST00000120198 477 ntBASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm18018-201ENSMUST00000198273 408 ntBASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms