Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm21470-201ENSMUST00000187680 696 ntBASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Auts2-212ENSMUST00000178555 309 ntBASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm27838-201ENSMUST00000184829 128 ntBASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm37714-201ENSMUST00000194742 342 ntBASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav6n-6A0A075B6B2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms