Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm22189-201ENSMUST00000103822 86 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm16215-201ENSMUST00000161990 637 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm29608-201ENSMUST00000190444 463 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm42612-201ENSMUST00000197986 623 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm43170-201ENSMUST00000199827 612 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm7730-201ENSMUST00000212486 454 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav5-4A0A075B652 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm5354-201ENSMUST00000182417 973 ntBASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Mir7221-201ENSMUST00000184009 72 ntBASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm42550-201ENSMUST00000201553 960 ntBASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms