Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav8-1A0A075B641 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gm9385-201ENSMUST00000117563 472 ntBASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gm11543-201ENSMUST00000120758 370 ntBASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.29□□□□□ -0.92
Trav8-1A0A075B641 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms