Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb2S4R1M3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
H2afb2S4R1M3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
H2afb2S4R1M3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Mir686-201ENSMUST00000102174 109 ntBASIC13□□□□□ -0.33
H2afb2S4R1M3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Gm11618-201ENSMUST00000117946 267 ntBASIC13□□□□□ -0.33
H2afb2S4R1M3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 H2-Pa-201ENSMUST00000182803 626 ntBASIC13□□□□□ -0.33
H2afb2S4R1M3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13□□□□□ -0.33
H2afb2S4R1M3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13□□□□□ -0.33
H2afb2S4R1M3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13□□□□□ -0.33
H2afb2S4R1M3 AC132467.2-202ENSMUST00000227726 559 ntBASIC13□□□□□ -0.33
H2afb2S4R1M3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
H2afb2S4R1M3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
H2afb2S4R1M3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13□□□□□ -0.33
H2afb2S4R1M3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb2S4R1M3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
H2afb2S4R1M3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms