Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Gm14719-201ENSMUST00000121891 340 ntBASIC11.75□□□□□ -0.53
H2afb3S4R1G7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.75□□□□□ -0.53
H2afb3S4R1G7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb3S4R1G7 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Gm15376-201ENSMUST00000122258 783 ntBASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Gm5354-201ENSMUST00000182417 973 ntBASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb3S4R1G7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H2afb3S4R1G7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms