Protein–RNA interactions for Protein: Q9Z1N5

Ddx39b, Spliceosome RNA helicase Ddx39b, mousemouse

Known RBP Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39bQ9Z1N5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Gm19931-201ENSMUST00000198920 368 ntBASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.07□□□□□ -0.32
Ddx39bQ9Z1N5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Gm44397-201ENSMUST00000195950 113 ntBASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx39bQ9Z1N5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Gm12091-201ENSMUST00000146791 830 ntBASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx39bQ9Z1N5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms