Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh20Q9Z0M3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh20Q9Z0M3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh20Q9Z0M3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Gm6745-201ENSMUST00000199216 526 ntBASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Gm45384-201ENSMUST00000210451 277 ntBASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh20Q9Z0M3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Gm13612-201ENSMUST00000119276 390 ntBASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Gm7287-201ENSMUST00000205267 602 ntBASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh20Q9Z0M3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh20Q9Z0M3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms