Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm27741-201ENSMUST00000185060 237 ntBASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm5161-201ENSMUST00000075243 853 ntBASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Matn2-203ENSMUST00000226766 3252 ntBASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm8000-201ENSMUST00000188378 592 ntBASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cx3cr1Q9Z0D9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm37391-201ENSMUST00000194891 2318 ntBASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Mir449b-201ENSMUST00000104833 80 ntBASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 AC140397.2-201ENSMUST00000224213 834 ntBASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cx3cr1Q9Z0D9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cx3cr1Q9Z0D9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms