Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClcnkaQ9WUB7 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClcnkaQ9WUB7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Gm6447-201ENSMUST00000118905 835 ntBASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClcnkaQ9WUB7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm12490-201ENSMUST00000120255 560 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm12138-201ENSMUST00000122180 951 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Mir7221-201ENSMUST00000184009 72 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm8463-201ENSMUST00000208573 613 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Gm18473-201ENSMUST00000220543 868 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms