Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Clcf1Q9QZM3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Gm12203-201ENSMUST00000118235 598 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Gm12209-201ENSMUST00000120089 596 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Snora78-201ENSMUST00000158630 128 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Gm27331-201ENSMUST00000183705 60 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clcf1Q9QZM3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clcf1Q9QZM3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clcf1Q9QZM3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms