Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smco4Q9JIS3 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Smco4Q9JIS3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Gm15565-201ENSMUST00000118890 427 ntBASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Gm27390-201ENSMUST00000184516 176 ntBASIC10.37□□□□□ -0.75
Smco4Q9JIS3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.37□□□□□ -0.75
Smco4Q9JIS3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco4Q9JIS3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms