Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Proscos-202ENSMUST00000178990 666 ntBASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Gm28911-201ENSMUST00000188837 117 ntBASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.56□□□□□ -0.24
Cpne8Q9DC53 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Gm18473-201ENSMUST00000220543 868 ntBASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne8Q9DC53 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne8Q9DC53 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm27701-201ENSMUST00000184498 110 ntBASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm18018-201ENSMUST00000198273 408 ntBASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm6458-201ENSMUST00000211573 635 ntBASIC13.54□□□□□ -0.24
Cpne8Q9DC53 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms