Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph3bQ9DA80 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph3bQ9DA80 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph3bQ9DA80 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph3bQ9DA80 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rsph3bQ9DA80 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph3bQ9DA80 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph3bQ9DA80 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm11978-201ENSMUST00000122315 466 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm17208-201ENSMUST00000168388 535 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm29396-201ENSMUST00000185659 716 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm44364-201ENSMUST00000198368 141 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm9368-201ENSMUST00000219348 831 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph3bQ9DA80 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Gm12241-201ENSMUST00000118330 726 ntBASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Gm13342-201ENSMUST00000121055 207 ntBASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Gm37042-201ENSMUST00000193816 581 ntBASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph3bQ9DA80 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rsph3bQ9DA80 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rsph3bQ9DA80 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.27□□□□□ -0.13
Rsph3bQ9DA80 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.27□□□□□ -0.13
Rsph3bQ9DA80 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms