Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ift27Q9D0P8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift27Q9D0P8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift27Q9D0P8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ift27Q9D0P8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift27Q9D0P8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ift27Q9D0P8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Mir3113-201ENSMUST00000175478 76 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Ift27Q9D0P8 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Gm11745-201ENSMUST00000121669 448 ntBASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Gm5425-201ENSMUST00000214125 459 ntBASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Daam2-202ENSMUST00000224595 1926 ntBASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ift27Q9D0P8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms