Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gm11594-201ENSMUST00000122313 162 ntBASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Paupar-201ENSMUST00000194826 3482 ntBASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm12403-201ENSMUST00000121384 959 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm38294-201ENSMUST00000192831 381 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm18905-201ENSMUST00000205454 928 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1bQ9D0N7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms