Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Gm12490-201ENSMUST00000120255 560 ntBASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.45□□□□□ -0.42
Shmt2Q9CZN7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm42550-201ENSMUST00000201553 960 ntBASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm6983-201ENSMUST00000214912 628 ntBASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shmt2Q9CZN7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shmt2Q9CZN7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms