Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Snf8Q9CZ28 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Gm6447-201ENSMUST00000118905 835 ntBASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Gm21854-201ENSMUST00000179901 471 ntBASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Snf8Q9CZ28 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Snf8Q9CZ28 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Snf8Q9CZ28 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Gm27989-201ENSMUST00000184721 107 ntBASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snf8Q9CZ28 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms