Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Gm37008-201ENSMUST00000195712 319 ntBASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otud1Q9CUB6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Gm25261-201ENSMUST00000157416 134 ntBASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Mir1938-201ENSMUST00000158746 100 ntBASIC12.34□□□□□ -0.43
Otud1Q9CUB6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Gm25927-201ENSMUST00000175058 117 ntBASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Gm19184-201ENSMUST00000196798 928 ntBASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms