Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm11793-201ENSMUST00000120433 981 ntBASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm7809-201ENSMUST00000153199 742 ntBASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm6222-202ENSMUST00000182143 629 ntBASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Mir6420-201ENSMUST00000185032 102 ntBASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm5781-201ENSMUST00000219792 443 ntBASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Gm8099-201ENSMUST00000200510 742 ntBASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Gm18935-201ENSMUST00000212692 664 ntBASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm7Q9CQQ8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms