Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gm17968-201ENSMUST00000194902 784 ntBASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Gm15427-201ENSMUST00000117288 531 ntBASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Gm45453-201ENSMUST00000211758 853 ntBASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RTRAFQ9CQE8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm12350-201ENSMUST00000121208 462 ntBASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm1401-201ENSMUST00000122048 772 ntBASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.54□□□□□ -0.72
RTRAFQ9CQE8 Gm44492-201ENSMUST00000197012 141 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms