Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm14701-201ENSMUST00000117156 348 ntBASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm15240-201ENSMUST00000118156 720 ntBASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm27622-201ENSMUST00000183779 60 ntBASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm44335-201ENSMUST00000196879 141 ntBASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm44297-201ENSMUST00000198304 141 ntBASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm44346-201ENSMUST00000198851 141 ntBASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Krt88Q9CPR6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm6415-201ENSMUST00000118488 348 ntBASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm27533-201ENSMUST00000183800 152 ntBASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.74□□□□□ -0.53
Krt88Q9CPR6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Krt88Q9CPR6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms