Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf2a1Q99PM3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gtf2a1Q99PM3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.21□□□□□ -0.14
Gtf2a1Q99PM3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf2a1Q99PM3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf2a1Q99PM3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf2a1Q99PM3 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.21□□□□□ -0.14
Gtf2a1Q99PM3 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf2a1Q99PM3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf2a1Q99PM3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2a1Q99PM3 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Gm7889-201ENSMUST00000185591 958 ntBASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2a1Q99PM3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Gm44415-201ENSMUST00000204151 2112 ntBASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2a1Q99PM3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf2a1Q99PM3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf2a1Q99PM3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf2a1Q99PM3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf2a1Q99PM3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms