Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm15240-201ENSMUST00000118156 720 ntBASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm27772-201ENSMUST00000184900 187 ntBASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cttnbp2nlQ99LJ0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm44344-201ENSMUST00000200287 129 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm43703-201ENSMUST00000200523 763 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cttnbp2nlQ99LJ0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Gm17330-201ENSMUST00000221047 165 ntBASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cttnbp2nlQ99LJ0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms