Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.69□□□□□ -0.22
Clp1Q99LI9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.68□□□□□ -0.22
Clp1Q99LI9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm13296-201ENSMUST00000117854 997 ntBASIC13.68□□□□□ -0.22
Clp1Q99LI9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm25116-201ENSMUST00000157191 122 ntBASIC13.68□□□□□ -0.22
Clp1Q99LI9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm8018-201ENSMUST00000173536 789 ntBASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.68□□□□□ -0.22
Clp1Q99LI9 Rprl1-202ENSMUST00000198476 238 ntBASIC13.68□□□□□ -0.22
Clp1Q99LI9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.68□□□□□ -0.22
Clp1Q99LI9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clp1Q99LI9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.67□□□□□ -0.22
Clp1Q99LI9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Gm45224-201ENSMUST00000208203 414 ntBASIC13.67□□□□□ -0.22
Clp1Q99LI9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.67□□□□□ -0.22
Clp1Q99LI9 Gm10312-201ENSMUST00000078515 489 ntBASIC13.67□□□□□ -0.22
Clp1Q99LI9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clp1Q99LI9 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.67□□□□□ -0.22
Clp1Q99LI9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms