Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Gm28911-201ENSMUST00000188837 117 ntBASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm11478-201ENSMUST00000117851 599 ntBASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm12138-201ENSMUST00000122180 951 ntBASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.59□□□□□ -0.39
Vmp1Q99KU0 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm5161-201ENSMUST00000075243 853 ntBASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vmp1Q99KU0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vmp1Q99KU0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vmp1Q99KU0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
Vmp1Q99KU0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vmp1Q99KU0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vmp1Q99KU0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vmp1Q99KU0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gm15371-201ENSMUST00000117057 784 ntBASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gm15678-201ENSMUST00000117573 960 ntBASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Gm24447-201ENSMUST00000083977 338 ntBASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vmp1Q99KU0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms