Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Gm9002-201ENSMUST00000178437 499 ntBASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb1Q91Y08 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb1Q91Y08 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm11803-201ENSMUST00000119966 444 ntBASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm12490-201ENSMUST00000120255 560 ntBASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm15806-201ENSMUST00000120696 955 ntBASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm13123-201ENSMUST00000122173 492 ntBASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm27892-201ENSMUST00000185017 106 ntBASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm37922-201ENSMUST00000195596 455 ntBASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm10012-201ENSMUST00000078252 192 ntBASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb1Q91Y08 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb1Q91Y08 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms