Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb5Q91XZ5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm25214-201ENSMUST00000104573 129 ntBASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Mir5132-201ENSMUST00000175166 71 ntBASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gm13097-201ENSMUST00000210722 397 ntBASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb5Q91XZ5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm13875-201ENSMUST00000120162 282 ntBASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm12291-201ENSMUST00000121627 311 ntBASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm44967-201ENSMUST00000207047 631 ntBASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb5Q91XZ5 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb5Q91XZ5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms