Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.07■□□□□ 0
StrcQ8VIM6 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
StrcQ8VIM6 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.07■□□□□ 0
StrcQ8VIM6 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.07■□□□□ 0
StrcQ8VIM6 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.07■□□□□ 0
StrcQ8VIM6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
StrcQ8VIM6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.06■□□□□ 0
StrcQ8VIM6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
StrcQ8VIM6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
StrcQ8VIM6 Gm11801-201ENSMUST00000117807 746 ntBASIC15.06■□□□□ 0
StrcQ8VIM6 Gm7722-201ENSMUST00000120646 741 ntBASIC15.06■□□□□ 0
StrcQ8VIM6 Gm13263-201ENSMUST00000121271 838 ntBASIC15.06■□□□□ 0
StrcQ8VIM6 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC15.06■□□□□ 0
StrcQ8VIM6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
StrcQ8VIM6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.06■□□□□ 0
StrcQ8VIM6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
StrcQ8VIM6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.06■□□□□ 0
StrcQ8VIM6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
StrcQ8VIM6 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.06■□□□□ 0
StrcQ8VIM6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Gm25076-201ENSMUST00000104098 132 ntBASIC15.06■□□□□ 0
StrcQ8VIM6 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.06■□□□□ 0
StrcQ8VIM6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.06■□□□□ 0
StrcQ8VIM6 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.06■□□□□ 0
StrcQ8VIM6 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
StrcQ8VIM6 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.06■□□□□ 0
StrcQ8VIM6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
StrcQ8VIM6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
StrcQ8VIM6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
StrcQ8VIM6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
StrcQ8VIM6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
StrcQ8VIM6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
StrcQ8VIM6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
StrcQ8VIM6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
StrcQ8VIM6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.05■□□□□ 0
StrcQ8VIM6 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC15.05■□□□□ 0
StrcQ8VIM6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
StrcQ8VIM6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
StrcQ8VIM6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.05■□□□□ -0
StrcQ8VIM6 Gm25545-201ENSMUST00000122673 323 ntBASIC15.05■□□□□ -0
StrcQ8VIM6 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.05■□□□□ -0
StrcQ8VIM6 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.05■□□□□ -0
StrcQ8VIM6 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.05■□□□□ -0
StrcQ8VIM6 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.05■□□□□ -0
StrcQ8VIM6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.05■□□□□ -0
StrcQ8VIM6 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.05■□□□□ -0
StrcQ8VIM6 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
StrcQ8VIM6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
StrcQ8VIM6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
StrcQ8VIM6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
StrcQ8VIM6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
StrcQ8VIM6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
StrcQ8VIM6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms