Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Gm18473-201ENSMUST00000220543 868 ntBASIC11.91□□□□□ -0.5
Nkd2Q8VE28 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd2Q8VE28 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Gm13689-201ENSMUST00000119360 685 ntBASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Gm24644-201ENSMUST00000157114 139 ntBASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.9□□□□□ -0.5
Nkd2Q8VE28 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd2Q8VE28 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkd2Q8VE28 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkd2Q8VE28 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkd2Q8VE28 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkd2Q8VE28 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Nkd2Q8VE28 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.89□□□□□ -0.51
Nkd2Q8VE28 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.89□□□□□ -0.51
Nkd2Q8VE28 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms